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Syllabus 2022-23 - 75112003 - New Technologies for Food Microbiology (Nuevas tecnologías en microbiología de alimentos)

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  • Level 1: Tutorial support sessions, materials and exams in this language
  • Level 2: Tutorial support sessions, materials, exams and seminars in this language
  • Level 3: Tutorial support sessions, materials, exams, seminars and regular lectures in this language
DEGREE: Máster Univ. en Avances y seguridad de los alimentos (75112003)
FACULTY: Centro de Estudios de Postgrado
DEGREE: Doble Máster en Avances en seguridad de los alimentos y MFPES (Profesorado) (77712008)
FACULTY: Centro de Estudios de Postgrado
ACADEMIC YEAR: 2022-23
COURSE: New Technologies for Food Microbiology
SYLLABUS
1. COURSE BASIC INFORMATION
NAME: New Technologies for Food Microbiology
CODE: 75112003 (*) ACADEMIC YEAR: 2022-23
LANGUAGE: English LEVEL: 1
ECTS CREDITS: 6.0 YEAR: 1 SEMESTER: PC
2. LECTURER BASIC INFORMATION
NAME: GRANDE BURGOS, MARÍA JOSÉ
DEPARTMENT: U130 - CIENCIAS DE LA SALUD
FIELD OF STUDY: 630 - MICROBIOLOGÍA
OFFICE NO.: B3 - 250 E-MAIL: mjgrande@ujaen.es P: 953213044
WEBSITE: https://www.ujaen.es/departamentos/ciesal/area-de-microbiologia
ORCID: https://orcid.org/0000-0002-4803-0562
LANGUAGE: English LEVEL: 1
NAME: GÁLVEZ DEL POSTIGO RUIZ, ANTONIO MIGUEL
DEPARTMENT: U130 - CIENCIAS DE LA SALUD
FIELD OF STUDY: 630 - MICROBIOLOGÍA
OFFICE NO.: B3 - B3-249 E-MAIL: agalvez@ujaen.es P: 953-212160
WEBSITE: -
ORCID: https://orcid.org/0000-0002-5894-5029
LANGUAGE: English LEVEL: 1
NAME: PÉREZ PULIDO, RUBÉN
DEPARTMENT: U130 - CIENCIAS DE LA SALUD
FIELD OF STUDY: 630 - MICROBIOLOGÍA
OFFICE NO.: B3 - 270 E-MAIL: rppulido@ujaen.es P: 953213378
WEBSITE: -
ORCID: https://orcid.org/0000-0001-7257-7528
LANGUAGE: English LEVEL: 2
3. CONTENT DESCRIPTION

1.- DNA extraction
- DNA extraction from bacteria (phenol-chloroform)
- DNA extraction from bacterial colony
- DNA extraction from food
- Determination of DNA concentration
- DNA gel electophoresis

2.- Molecular identification of bacteria
- Bacterial identification by PCR and DNA Sequencing of 16S rRNA gene

3.-Genomic fingerprinting of bacteria
- RAPD-PCR fingerprinting(Randomly Amplified Polymorphic DNA)
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4.- Culture independent study of microbial populations
- DNA isolation from food
- PCR amplification of the microbial community
- TTGE analysis (Temporal Temperature Gradient Gel Electrophoresis)

4. COURSE DESCRIPTION AND TEACHING METHODOLOGY

ACTIVITIES HOURS ATTENDANCE HOMEWORK TOTAL HORAS  ECTS CREDITS

COMPETENCIES

(CODE

ACTIVITY 1: LECTURE (THEORY) 24.0 51.0 75.0 3.0
  • CB6
  • CB7
  • CB9
  • CE4
  • CE5
  • CG1
  • CG5
  • CT1
  • CT2
  • CT3
  • CT5
  • CT6
  • CT7
  • CT8
ACTIVITY 2: LECTURE (PRACTICE) 56.0 19.0 75.0 3.0
  • CB6
  • CB7
  • CB9
  • CE4
  • CE5
  • CG1
  • CG5
  • CT1
  • CT2
  • CT3
  • CT5
  • CT6
  • CT7
TOTALES: 80.0 70.0 150.0 6.0  

 

Attendance and Participation: Class attendance are obligatory, the student's participation in class, discussions and proposed about differents topics will be valued, individually and students groups.

Students with special educational needs should contact the Student Attention Service (Servicio de Atención y Ayudas al Estudiante) in order to receive the appropriate academic support

5. ASSESSMENT METHODOLOGY

ASPECT CRITERIA INSTRUMENT PERCENTAGE
Lecture (Theory, Practice) Attendance, active
participation in
the laboratory and
delivery of
questionnaires and summaries.
Competencies
evaluated: CB6, CB7, CB9, CE4, CE5, CG1, CG5, CT1, CT2, CT3, CT5, CT6, CT7 and CT8.

Control of attendance

Practice exam

Evaluation of questionnaries and summaries

85%
Exercises at home Delivery of the
exercises made
Competencies
evaluated: GE1,
CB6, CB7, CB9, CE4, CE5, CG1, CG5, CT1, CT2, CT3, CT5, CT6, CT7 and CT8.
Review and
correction of
exercises delivered
15%

 

6. BOOKLIST
MAIN BOOKLIST:
  • Molecular Techniques in the Microbial Ecology of Fermented Foods [Recurso electrónico] . Edition: -. Author: Cocolin, Luca. Publisher: New York, NY : Springer Science+Business Media, LLC, 2008.  (Library)
  • Brock Biology of Microorganisms. Edition: 12th ed.. Author: -. Publisher: San Francisco, CA : Pearson Benjamin Cummings, c2009.  (Library)
  • Molecular methods for microbial identification and typing. Edition: -. Author: Towner, K. J.. Publisher: London [etc.]: Chapman & Hall, 1993  (Library)
  • Molecular Identification, Systematics, and Population Structure of Prokaryotes [Recurso electrónico]. Edition: -. Author: Stackebrandt, Erko. Publisher: Berlin, Heidelberg : Springer-Verlag Berlin Heidelberg, 2006.  (Library)
ADDITIONAL BOOKLIST:
  • New high throughput technologies for DNA sequencing and genomics [Recurso electrónico] . Edition: -. Author: -. Publisher: Amsterdam &#59; Boston : Elsevier, 2007.  (Library)
  • Next generation sequencing : current technologies and applications. Edition: -. Author: -. Publisher: Norfolk, U.K. : Caister Academic Press, cop. 2014  (Library)
  • Statistical analysis of next generation sequencing data. Edition: -. Author: -. Publisher: Cham : Springer, 2014  (Library)
  • DNA methods in food safety [Recurso electrónico] : molecular typing of foodborne and waterborne bac. Edition: -. Author: -. Publisher: -  (Library)
  • Molecular Typing in Bacterial Infections [Recurso electrónico]. Edition: -. Author: -. Publisher: -  (Library)
8. VIRTUAL / CLASSROOM TEACHING SCENARIO

I.- METHODOLOGIES AND TRAINING ACTIVITIES

 

A1. Training activities in the classroom (in case of socio-sanitary restrictions, these activities could be done by videoconference).

A2. 50% of the activities will be in the lab, 50% online.

 

II.- EVALUATION SYSTEM

Student work: 85%

Participation in other activities: 15%

  III.- RESOURCES

Main resources will be those available through google suite. Bibliographic and bioinformatic resources from the University.

9. VIRTUAL TEACHING SCENARIO

I.- METHODOLOGIES AND TRAINING ACTIVITIES

 

All training activities will be carried out online

 

II.- EVALUATION SYSTEM

Student work: 85%

Online participation in other activities: 15%

 

III.- RESOURCES

Main resources will be those available through google suite. Bibliographic and bioinformatic resources from the University.

 

DATA PROTECTION CLAUSE (on line exams)

Institution in charge of data processing: Universidad de Jaén, Campus Las Lagunillas, s/n, 23071 Jaén

Data Protection Delegate: dpo@ujaen.es

Purpose: In accordance with the Universities Law and other national and regional regulations in force, carrying out exams and assessment tests corresponding to the courses students are registered in. In order to avoid frauds while sitting the exam, the exam will be answered using a videoconference system, being able the academic staff of the University of Jaén to compare and contrast the image of the person who is answering the exam with the student's photographic files. Likewise, in order to provide the exam with evidential content for revisions or claims, in accordance with current regulation frameworks, the exam will be recorded and stored.

Legitimacy: compliance with legal obligations (Universities Law) and other national and regional regulations currently in force.

Addressees: service providers who are the owners of the platforms where the exams are carried out and with whom the University of Jaén has signed the corresponding data access contracts.

Storage periods: those established in current in force regulations. In the specific case of exam videoconference recordings, not before the examination records and transcripts are closed or the exam can still be reviewed or challenged.

Rights: you can exercise your right of access, amendment, cancellation, opposition, suppression, limitation and portability by sending a letter to the postal or electronic address indicated above. In the event that you consider that your rights have been violated, you may submit a complaint to the Andalusian Council for Transparency and Data Protection www.ctpdandalucia.es

CLASS RECORDING CLAUSE PERSONAL DATA PROTECTION

Person in charge: Universidad de Jaén, Paraje Las Lagunillas, s/n; Tel.953 212121; www.ujaen.es

Data protection delegate (DPO): TELEFÓNICA, S.A.U. ; Email: dpo@ujaen.es

Procedure aim: To manage proper recordings of teaching sessions with the aim of facilitating learning process under a multimodal and/or online teaching

Period for record storage: Images will be kept during legal term according to regulations in force

Legitimacy: Data will be managed according to legal regulations (Organic Law 6/2001, December 21, on Universities) and given consent provided by selecting corresponding box in legal admission documents

Data recipients (transfers or assignments): Any person allowed to get access to every teaching modality

Rights: You may exercise your rights of access, rectification, cancellation, portability, limitation of processing, deletion or, where appropriate, opposition. To exercise these rights, you must submit a written request to the Information, Registration and Electronic Administration Service of the University of Jaen at the address above, or by e-mail to the address above. You must specify which of these rights you are requesting to be satisfied and, at the same time, you must attach a photocopy of your ID card or equivalent identification document. In case you act through a representative, legal or voluntary, you must also provide a document that proves this representation and identification. Likewise, if you consider that your right to personal data protection has been violated, you may file a complaint with the Andalusian Data Protection and Transparency Council www.ctpdandalucia.es