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Syllabus 2021-22 - 10212008 - Plant Physiology (Fisiología vegetal)

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  • Level 1: Tutorial support sessions, materials and exams in this language
  • Level 2: Tutorial support sessions, materials, exams and seminars in this language
  • Level 3: Tutorial support sessions, materials, exams, seminars and regular lectures in this language
DEGREE: Grado en Biología
FACULTY: FACULTY OF EXPERIMENTAL SCIENCES
ACADEMIC YEAR: 2021-22
COURSE: Plant Physiology
SYLLABUS
1. COURSE BASIC INFORMATION
NAME: Plant Physiology
CODE: 10212008 ACADEMIC YEAR: 2021-22
LANGUAGE: English LEVEL: 2
ECTS CREDITS: 12.0 YEAR: 3 SEMESTER: AN
2. LECTURER BASIC INFORMATION
NAME: FERNÁNDEZ OCAÑA, ANA MARÍA
DEPARTMENT: U102 - BIOLOGIA ANIMAL, BIOL.VEGETAL Y ECOLOGIA
FIELD OF STUDY: 412 - FISIOLOGÍA VEGETAL
OFFICE NO.: B3 - 142 E-MAIL: amocana@ujaen.es P: 953212784
WEBSITE: https://www.ujaen.es/departamentos/bioani/contactos/fernandez-ocana-ana-ma
ORCID: https://orcid.org/0000-0002-2686-9949
LANGUAGE: English LEVEL: 2
3. CONTENT DESCRIPTION

1) Introduction to Plant Physiology
Objecttives in the study of Plant Physiology
Plant characteristics
Classification of organisms based on the type of energy and molecules they require from outside
2) Light and the photosynthetic apparatus.
Introduction
Study of the photosynthetic apparatus: chloroplasts
Photosynthetic pigments
Characteristics of light radiation
Capture of light by pigments
3) The photochemical stage of photosynthesis.
Introduction
Acyclic transport of e - and photophosphorylation
Cyclic photophosphorylation
Herbicides and the light phase of photosynthesis
4) Photosynthetic assimilation of carbon.Calvin cycle.
Synthesis of sucrose starch and fructans
Photorespiration
CO 2 concentration mechanisms
C assimilation in C 4 plants
Acid metabolism of crassulaceae
Other processes that take place in the chloroplast.
5) Influence of the environment on photosynthesis.
Introduction
Factors influencing photosynthesis
Environmental
Endogenous
6) Respiration in plants.
Introduction
Formation of hexoses from reserve carbohydrates
Glycolysis
Anaerobic Processing of Pyruvate
Aerobic processing of pyruvate
The pentose phosphate pathway
Factors influencing respiration in plants
7) Assimilation of nitrogen and sulfur.
Introduction
Nitrogen assimilation
Sulfur assimilation
Transfer of energy and reducing potential from the chloroplast to the hyaloplasm
Assimilation of other elements
8) Introduction to secondary metabolism.
Secondary metabolites: concept, characteristics and functions
Terpenes
Phenolic compounds
Nitrogen secondary compounds
9) Water in plants: basic concepts.
Properties of water that give it biological importance
Water movements
Water potential and its components: units
Measurement methods of the different potentials
10) Movement of water in the soil-plant-atmosphere continuum.
Water in the floor. Introduction
Root absorption zones
Xylem anatomy
Ascent of the water through the xylem
Perspiration through the stomata and its control
11) Transport by the phloem.
Phloem anatomy
Transported materials
Transport characteristics
Phloem loading
Phloem discharge
Mechanism of transport via phloem
Control of the distribution and use of photosynthesized
Phloem as a signal transport pathway
12) Mineral nutrition.
Introduction
Essential elements and essentiality criteria.
Macronutrients and micronutrients.
Essential elements functions
Analysis of nutritional status
Role of symbiotic associations.
13) Solute absorption and transport.
Introduction
Active and passive transport and the Nerst equation
Active and passive transport mechanisms in plants
Plasmalemma redox systems
Membrane potential and pH and cytoplasmic free Ca 2+ homeostasis
14) Plant development.
Introduction
Basic concepts
Life cycle of plants
Embryogenesis
Vegetative stage
Reproductive stage
15) Endogenous regulation of development: Plant hormones.
Hormones as chemical messengers
Chemical nature, physiological effects and mechanisms of action of hormones:
Auxins
Cytokinins
Gibberellins
Ethylene
Abscisic acid
Brasinosteroids
Other hormones and growth regulators
16) Photomorphogenesis.
Introduction
Phytochromes
Blue light receivers
Cryptochromes
Phototropins
Zeaxanthin
UV b photoreceptors
17) Flowering.
Introduction
Flower development
Flowering regulation
Photoperiodicity
Vernalization
Other signs involved in flowering
18) The seed and the fruit
Pollination
The seed
Developing
Sleeping
Germination
The fruit
Growth and development
Fruit nutrition
Maturation
19) Senescence and abscission.
Introduction
Physiological and biochemical processes that are modified during senescence
Senescence of some organs of the plant
Programmed cell death
Control of senescence
Abscission
20) Plant movements.
Introduction
Tropisms: concept and types
Nastias: concept and types

LABORATORY INTERNSHIP PROGRAM:

Preparation of nutrient solutions for growing plants
Putting into germination and sowing seedlings.
Chloroplast extraction and Hill reaction in plants subjected to different light radiation.
Diagnosis of nutritional deficiencies by visual symptoms
Determination of nitrate reductase activity
Study of the effect of light radiation on the concentration of chlorophylls a and b
Taking values ​​of growth parameters
Nitrogen determination in leaf
Determination of Fe content in leaf
Water relations
Determination of water potential by the Chardakov method
In vitro plant culture
Visualization of the effect of cytokinins
Effect of gibberellic acid and abscisic acid on the germination of lentil seeds
Triple response to ethylene of etiolated soybean seedlings

4. COURSE DESCRIPTION AND TEACHING METHODOLOGY

The practices are configured as research projects from which results are extracted and analyzed. These practices are grouped into three major thematic blocks that are photosynthesis, mineral nutrition, and growth and development. Students will have to make a notebook of practices to deliver at the end of the course with the results of each block of practices

SEMINARS PROGRAM:

The seminars (18 h) will be dedicated to recapitulating, in small groups, and with the active participation of the students, relevant aspects of the theoretical contents of the subject. They are also intended to carry out problems and solve questions that reinforce the understanding of some theoretical content through its practical application.

2 Seminars on the contents of the first semester (4 hours)

2 Seminars on the contents of the second semester (4 hours)

2 seminars in the laboratory to obtain data and analysis of the results of the fitohormones practices

3 Seminars in the computer classroom for the statistical analysis of the results of the practices carried out

Students with special educational needs should contact the Student Attention Service (Servicio de Atención y Ayudas al Estudiante) in order to receive the appropriate academic support

5. ASSESSMENT METHODOLOGY

Laboratory sessions, seminars and computer sessions are mandatory. The course cannot be passed with 3 or more unexcused absences.

The simple attendance to the theory classes in the classroom will not be valued positively at the time of the qualification. However, it is advisable to attend. Among other reasons, because as you will see below, throughout each semester there will be some class tests, without prior notice, which will count towards the final grade.

To evaluate the knowledge acquired in the theoretical and practical sessions, the following written tests will be carried out:

a) Two partial exams each valued at 37.5 points: 35 corresponding to theory and 2.5 to practicals

b) Class tests that will be carried out approximately every time 2 theory topics are completed and that it will not be necessary to notify in advance. The set of these tests will have a total evaluation of 5 additional points in each partial.

To pass each of the two partial exams it will be necessary to obtain 19 points between the partial exam and the class tests.

c) A final exam of the two partial exams valued at 75 points: 70 for theory and 5 for practicals (37.5 for each of them).

In this final exam, those partial exams not approved or not previously presented may be approved. To pass the final exam, you will have to have a minimum of 13 points in each of the partials and add a minimum of 37.5 between them.

The grade for seminars and participation in the virtual teaching platform (10 maximum), as well as that related to the practice notebook (15 maximum) will only be added to the grade for the written exams when they have been passed.

6. BOOKLIST
MAIN BOOKLIST:
  • The molecular life of plants . Edition: -. Author: -Russell Jones, Helen Ougham, Howard Thomas, Susan Waaland. Publisher: Chichester : Wiley-Blackwell, 2013.
    • Notes: 1ª edición. Publicado en 2013
     (Library)
  • Plant physiology and development. Edition: 6th ed. Author: -. Publisher: Sunderland : Sinauer Associates : Oxford University Press, cop. 2018  (Library)
  • Plant physiology and development. Edition: 6th ed. Author: -. Publisher: Sunderland : Sinauer Associates, 2015  (Library)
  • Plant physiology. Edition: 5th ed.. Author: Taiz, Lincoln.. Publisher: Sunderland, Mass. : Sinauer Associates, 2010.  (Library)
  • Physicochemical and environmental plant physiology [Recurso electrónico]. Edition: 4th ed.. Author: Nobel, Park S.. Publisher: Amsterdam ; Boston : Academic Press, 2009.  (Library)
  • Biochemistry and molecular biology of plants. Edition: 2nd ed. Author: -. Publisher: Rockville : American Society of Plant Physiologists, 2015  (Library)
  • Fisiología vegetal. Edition: -. Author: Taiz, Lincoln. Publisher: Castelló de la Plana : Publicacions de la Universitat Jaume I, D.L. 2006  (Library)
  • Introduction to plant physiology. Edition: 3rd ed., [international ed.]. Author: Hopkins, William G.. Publisher: New York: John Wiley & Sons, cop. 2004  (Library)
  • Modern plant physiology.. Edition: -. Author: Sinha, R. K.. Publisher: Harrow: Alpha Science International, 2005  (Library)
  • Fundamentos de fisiología vegetal [Recurso electrónico]. Edition: 2ª ed. Author: -. Publisher: Madrid : McGraw-Hill , 2013  (Library)
  • Fundamentos básicos de fisiología vegetal y animal [Recurso electrónico]. Edition: 1ª ed. Author: Escaso Santos, Fernando. Publisher: México : Pearson, 2011  (Library)
  • Biochemistry and molecular biology of plants. Edition: 2nd ed. Author: -. Publisher: Rockville : American Society of Plant Physiologists, 2015  (Library)
ADDITIONAL BOOKLIST:
  • Plant Hormones [Recurso electrónico] : Biosynthesis, Signal Transduction, Action!. Edition: 3.. Author: Davies, Peter J.. Publisher: Dordrecht : Springer Science+Business Media B.V., 2010.  (Library)
  • Hormones, signals, and target cells in plant development. Edition: -. Author: Osborne, Daphne J.. Publisher: Cambridge: Cambridge University Press, 2005.  (Library)
  • Plant growth and development [Recurso electrónico] : hormones and environment. Edition: -. Author: Srivastava, L. M. (Lalit Mohan), 1932-. Publisher: Amsterdam ; Boston : Academic Press, c2002.  (Library)
  • Plant Nutrition of Greenhouse Crops [Recurso electrónico]. Edition: -. Author: Sonneveld, Cees. Publisher: Dordrecht : Springer Netherlands, 2009.  (Library)
  • Marschner's mineral nutrition of higher plants [Recurso electrónico]. Edition: 3rd ed. Author: Marschner, Petra. Publisher: Amsterdam ; Boston : Academic Press, c2012  (Library)
  • The Apoplast of Higher Plants: Compartment of Storage, Transport and Reactions [Recurso electrónico]. Edition: -. Author: Sattelmacher, Burkhard. Publisher: Dordrecht : Springer, 2007.  (Library)
  • Vascular transport in plants. Edition: -. Author: Holbrook, Noel Michele. Publisher: Burlington, MA : Elsevier Academic Press, 2005  (Library)
  • Integrative plant biochemistry [Recurso electrónico]. Edition: 1st ed.. Author: Phytochemical Society of North America. Meeting (45th : 2005 : La Jolla, Calif.). Publisher: Amsterdam ; Boston : Elsevier, 2006.  (Library)
  • Sulfur Metabolism in Plants [Recurso electrónico] : Mechanisms and Applications to Food Security and. Edition: -. Author: -. Publisher: Dordrecht : Springer Netherlands : Imprint: Springer, 2012  (Library)
7. VIRTUAL / CLASSROOM TEACHING SCENARIO

1- TEACHING METHODOLOGY AND TRAINING ACTIVITIES

Groups with number of students below the classroom capacity

 

 

Training activities

Format (classroom/online)*

Teaching methodology. Description

15 practical sessions in specialized laboratories

It will be in person

if the socio-sanitary
situation allows it

15 practical sessions, of 1 to 3 hours, in the teaching laboratories. Rotation of students if it would be capacity problems.   Retransmission of practical classes to the rest of the group.

70 sessions of theoretical contents 

It will be in person

if the socio-sanitary
situation allows it

Substitution for 70 sessions of synchronous participatory master classes, of one hour each, conducted by online videoconference.

4 sessions of 2 hours each for  the solution of works or problems. In teaching classrooms

It will be in person

if the socio-sanitary
situation allows it

They will consist of 4 sessions (small groups) in teaching classrooms. Two seminars will deal with theoretical aspects corresponding to the first semester and another two will correspond to teaching in the second semester

3 informatic sessions 

It will be in person

if the socio-sanitary
situation allows it

Analysis of the results of the practical congress and preparation of the abstracts and posters to be exposed at the congress.

Tutorías

 

It will be in person

if the socio-sanitary
situation allows it

 

Some tutorial sessions could be face-to-face and other sessions,  online (synchronous and asynchronous)

EVALUATION SYSTEM

  Ordinary and extraordinary calls

Evaluation test

 

Format

Description and teaching resources

Percentage

Final exam

 It will be in person if the socio-sanitary

situation allows it

Test-type and short questions in a exam done in person. It is mandatory to obtain a minimum of 5 out of 10 points to add the rest of the evaluation notes. In the event of an in-person impossibility, then online examination through the ILIAS platform or similar, and activation of a video camera for surveillance.

 50% 

Evaluation of seminars and training activities by computer.

It will be in person

if the socio-sanitary
situation allows it

 

 30% 

practice notebook evaluation

mandatory delivery
       
        

Qualifications of  works of the practical congress (abstract, poster and presentation)

 20% 

 

Resources

The necessary resources offered by the University of Jaén will be used (https://www.ujaen.es/her Herramientas-para-la-docencia-y-la-evaluacion-virtual) to carry out teaching and evaluation in the stage modality mixed. Electronic bibliographic resources from the Library of the University of Jaén will be used (https://www.ujaen.es/servicios/biblio/).

 

8. VIRTUAL TEACHING SCENARIO

1- TEACHING METHODOLOGY AND TRAINING ACTIVITIES

Groups with number of students below the classroom capacity

 

Training activities

Format (classroom/online)*

Teaching methodology. Description

15 practical sessions 

Online mandatory

The 15 laboratory sessions will be replaced by virtual classes in which the practical protocols will be provided to the students and the results and conclussions will be discussed, making it compulsory to carry out a work on each practice by the students that will be delivered to the corresponding teacher.

70 sessions of theoretical contents 

Online

Replacement of 70 sessions of master classes (one hour each), by online classes conducted by videoconference.

4 sessions of 2 hours each for  the solution of works or problems. In teaching classrooms

Online mandatory

They will consist of 4 online sessions (small groups) of which at least two of them will be tests on the theoretical content of the test type, carried out through the ILIAS platform or similar

3 informatic sessions 

Online mandatory

Analysis of the results of the practical congress and preparation of the abstracts and posters to be exposed at the congress.

Tutorías

 

Online

 

All the tutorial sessions will be  online 

 

EVALUATION SYSTEM

   Ordinary and extraordinary calls

Evaluation test type

 

 Format

Description and teaching resources

Percentag

Final exam

ONline

Exam with test questions. It is necessary to obtain a minimum of 5 out of 10 points to add the rest of the evaluation notes to the subject. Online examination through the ILIAS platform or similar, and activation of a video camera for surveillance.

 50% 

Seminars evaluation 

Online

At least two tests will be carried out on the content of the topics taught during the course using the ILIAS platform or similar and a surveillance camera.

 20% 

practical congress and practical protocols works

Online 

 

Compulsory submission of works related to the explained practical protocols and summary, poster and power point presentation

 30% 

 

Resources

The necessary resources offered by the University of Jaén will be used (https://www.ujaen.es/her Herramientas-para-la-docencia-y-la-evaluacion-virtual) to carry out teaching and evaluation in the stage modality mixed. Electronic bibliographic resources from the Library of the University of Jaén will be used (https://www.ujaen.es/servicios/biblio/).

DATA PROTECTION CLAUSE (on line exams)

Institution in charge of data processing: Universidad de Jaén, Campus Las Lagunillas, s/n, 23071 Jaén

Data Protection Delegate: dpo@ujaen.es

Purpose: In accordance with the Universities Law and other national and regional regulations in force, carrying out exams and assessment tests corresponding to the courses students are registered in. In order to avoid frauds while sitting the exam, the exam will be answered using a videoconference system, being able the academic staff of the University of Jaén to compare and contrast the image of the person who is answering the exam with the student's photographic files. Likewise, in order to provide the exam with evidential content for revisions or claims, in accordance with current regulation frameworks, the exam will be recorded and stored.

Legitimacy: compliance with legal obligations (Universities Law) and other national and regional regulations currently in force.

Addressees: service providers who are the owners of the platforms where the exams are carried out and with whom the University of Jaén has signed the corresponding data access contracts.

Storage periods: those established in current in force regulations. In the specific case of exam videoconference recordings, not before the examination records and transcripts are closed or the exam can still be reviewed or challenged.

Rights: you can exercise your right of access, amendment, cancellation, opposition, suppression, limitation and portability by sending a letter to the postal or electronic address indicated above. In the event that you consider that your rights have been violated, you may submit a complaint to the Andalusian Council for Transparency and Data Protection www.ctpdandalucia.es

CLASS RECORDING CLAUSE PERSONAL DATA PROTECTION

Person in charge: Universidad de Jaén, Paraje Las Lagunillas, s/n; Tel.953 212121; www.ujaen.es

Data protection delegate (DPO): TELEFÓNICA, S.A.U. ; Email: dpo@ujaen.es

Procedure aim: To manage proper recordings of teaching sessions with the aim of facilitating learning process under a multimodal and/or online teaching

Period for record storage: Images will be kept during legal term according to regulations in force

Legitimacy: Data will be managed according to legal regulations (Organic Law 6/2001, December 21, on Universities) and given consent provided by selecting corresponding box in legal admission documents

Data recipients (transfers or assignments): Any person allowed to get access to every teaching modality

Rights: You may exercise your rights of access, rectification, cancellation, portability, limitation of processing, deletion or, where appropriate, opposition. To exercise these rights, you must submit a written request to the Information, Registration and Electronic Administration Service of the University of Jaen at the address above, or by e-mail to the address above. You must specify which of these rights you are requesting to be satisfied and, at the same time, you must attach a photocopy of your ID card or equivalent identification document. In case you act through a representative, legal or voluntary, you must also provide a document that proves this representation and identification. Likewise, if you consider that your right to personal data protection has been violated, you may file a complaint with the Andalusian Data Protection and Transparency Council www.ctpdandalucia.es